Cluster: HRGMv2_1906_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1906
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1906_1 | HRGMv2_1906_1_191 | 183299 | 184768 | - | GH1 |
| sulfatase | HRGMv2_1906_1 | HRGMv2_1906_1_192 | 185058 | 185807 | + | S1_9 |
| CAZyme | HRGMv2_1906_1 | HRGMv2_1906_1_193 | 185794 | 187110 | + | GH4 |
| TC | HRGMv2_1906_1 | HRGMv2_1906_1_194 | 187158 | 188756 | - | 2.A.36.6.11 |
Gene ID: HRGMv2_1906_1_191
Type: CAZyme
Location: 183299 - 184768 (-)
Type: CAZyme
Location: 183299 - 184768 (-)
Gene ID: HRGMv2_1906_1_192
Type: sulfatase
Location: 185058 - 185807 (+)
Type: sulfatase
Location: 185058 - 185807 (+)
Gene ID: HRGMv2_1906_1_193
Type: CAZyme
Location: 185794 - 187110 (+)
Type: CAZyme
Location: 185794 - 187110 (+)
Gene ID: HRGMv2_1906_1_194
Type: TC
Location: 187158 - 188756 (-)
Type: TC
Location: 187158 - 188756 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.