Cluster: HRGMv2_1906_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1906
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1906_38 | HRGMv2_1906_38_5 | 4010 | 6163 | - | GH112 |
| TC | HRGMv2_1906_38 | HRGMv2_1906_38_6 | 6160 | 7290 | - | 3.A.1.1.26 |
| pfam | HRGMv2_1906_38 | HRGMv2_1906_38_7 | 7301 | 7468 | - | DUF6903 |
| TC | HRGMv2_1906_38 | HRGMv2_1906_38_8 | 7481 | 8353 | - | 3.A.1.1.18 |
| TC | HRGMv2_1906_38 | HRGMv2_1906_38_9 | 8364 | 9260 | - | 3.A.1.1.21 |
Gene ID: HRGMv2_1906_38_5
Type: CAZyme
Location: 4010 - 6163 (-)
Type: CAZyme
Location: 4010 - 6163 (-)
Gene ID: HRGMv2_1906_38_6
Type: TC
Location: 6160 - 7290 (-)
Type: TC
Location: 6160 - 7290 (-)
Gene ID: HRGMv2_1906_38_7
Type: pfam
Location: 7301 - 7468 (-)
Type: pfam
Location: 7301 - 7468 (-)
Gene ID: HRGMv2_1906_38_8
Type: TC
Location: 7481 - 8353 (-)
Type: TC
Location: 7481 - 8353 (-)
Gene ID: HRGMv2_1906_38_9
Type: TC
Location: 8364 - 9260 (-)
Type: TC
Location: 8364 - 9260 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.