Cluster: HRGMv2_1906_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1906
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1906_11 | HRGMv2_1906_11_53 | 43622 | 45502 | + | 4.A.1.2.13 |
| CAZyme | HRGMv2_1906_11 | HRGMv2_1906_11_54 | 45502 | 47142 | + | GH13_29 |
| TC | HRGMv2_1906_11 | HRGMv2_1906_11_55 | 47307 | 47993 | + | 2.A.78.1.1 |
| TC | HRGMv2_1906_11 | HRGMv2_1906_11_56 | 47986 | 48300 | + | 2.A.78.1.1 |
Gene ID: HRGMv2_1906_11_53
Type: TC
Location: 43622 - 45502 (+)
Type: TC
Location: 43622 - 45502 (+)
Gene ID: HRGMv2_1906_11_54
Type: CAZyme
Location: 45502 - 47142 (+)
Type: CAZyme
Location: 45502 - 47142 (+)
Gene ID: HRGMv2_1906_11_55
Type: TC
Location: 47307 - 47993 (+)
Type: TC
Location: 47307 - 47993 (+)
Gene ID: HRGMv2_1906_11_56
Type: TC
Location: 47986 - 48300 (+)
Type: TC
Location: 47986 - 48300 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.