Cluster: HRGMv2_1906_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1906
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1906_7 | HRGMv2_1906_7_50 | 39784 | 41220 | - | GH13_5 |
| pfam | HRGMv2_1906_7 | HRGMv2_1906_7_51 | 41289 | 41552 | - | Trns_repr_metal |
| TC | HRGMv2_1906_7 | HRGMv2_1906_7_52 | 41552 | 44035 | - | 3.A.3.5.15 |
Gene ID: HRGMv2_1906_7_50
Type: CAZyme
Location: 39784 - 41220 (-)
Type: CAZyme
Location: 39784 - 41220 (-)
Gene ID: HRGMv2_1906_7_51
Type: pfam
Location: 41289 - 41552 (-)
Type: pfam
Location: 41289 - 41552 (-)
Gene ID: HRGMv2_1906_7_52
Type: TC
Location: 41552 - 44035 (-)
Type: TC
Location: 41552 - 44035 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.