Cluster: HRGMv2_1906_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1906
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1906_4 | HRGMv2_1906_4_19 | 22135 | 24396 | - | GT2 |
| CAZyme | HRGMv2_1906_4 | HRGMv2_1906_4_20 | 24338 | 25390 | - | GT2 |
| TC | HRGMv2_1906_4 | HRGMv2_1906_4_21 | 25387 | 26484 | - | 9.B.34.1.2 |
Gene ID: HRGMv2_1906_4_19
Type: CAZyme
Location: 22135 - 24396 (-)
Type: CAZyme
Location: 22135 - 24396 (-)
Gene ID: HRGMv2_1906_4_20
Type: CAZyme
Location: 24338 - 25390 (-)
Type: CAZyme
Location: 24338 - 25390 (-)
Gene ID: HRGMv2_1906_4_21
Type: TC
Location: 25387 - 26484 (-)
Type: TC
Location: 25387 - 26484 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Species
Allocoprobacillus sp002160865
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.