Cluster: HRGMv2_1905_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1905
- CGC Family ID: CGCFAM_00503
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1905_9 | HRGMv2_1905_9_8 | 9792 | 12239 | - | GT4 |
| TC | HRGMv2_1905_9 | HRGMv2_1905_9_9 | 12257 | 13069 | - | 3.A.1.104.2 |
| TC | HRGMv2_1905_9 | HRGMv2_1905_9_10 | 13082 | 13894 | - | 3.A.1.104.1 |
Gene ID: HRGMv2_1905_9_8
Type: CAZyme
Location: 9792 - 12239 (-)
Type: CAZyme
Location: 9792 - 12239 (-)
Gene ID: HRGMv2_1905_9_9
Type: TC
Location: 12257 - 13069 (-)
Type: TC
Location: 12257 - 13069 (-)
Gene ID: HRGMv2_1905_9_10
Type: TC
Location: 13082 - 13894 (-)
Type: TC
Location: 13082 - 13894 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.