Cluster: HRGMv2_1905_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate: beta-mannan
- Genome ID: HRGMv2_1905
- CGC Family ID: CGCFAM_00066
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1905_7 | HRGMv2_1905_7_46 | 43366 | 44127 | - | GH1 |
| CAZyme | HRGMv2_1905_7 | HRGMv2_1905_7_47 | 44191 | 44838 | - | GH1 |
| TC | HRGMv2_1905_7 | HRGMv2_1905_7_48 | 44840 | 45169 | - | 4.A.3.2.8 |
Gene ID: HRGMv2_1905_7_46
Type: CAZyme
Location: 43366 - 44127 (-)
Type: CAZyme
Location: 43366 - 44127 (-)
Gene ID: HRGMv2_1905_7_47
Type: CAZyme
Location: 44191 - 44838 (-)
Type: CAZyme
Location: 44191 - 44838 (-)
Gene ID: HRGMv2_1905_7_48
Type: TC
Location: 44840 - 45169 (-)
Type: TC
Location: 44840 - 45169 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.