Cluster: HRGMv2_1905_CGC32
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1905
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1905_41 | HRGMv2_1905_41_5 | 4182 | 6335 | - | GH112 |
| TC | HRGMv2_1905_41 | HRGMv2_1905_41_6 | 6332 | 7462 | - | 3.A.1.1.26 |
| pfam | HRGMv2_1905_41 | HRGMv2_1905_41_7 | 7473 | 7640 | - | DUF6903 |
| TC | HRGMv2_1905_41 | HRGMv2_1905_41_8 | 7653 | 8525 | - | 3.A.1.1.18 |
| TC | HRGMv2_1905_41 | HRGMv2_1905_41_9 | 8538 | 9434 | - | 3.A.1.1.21 |
Gene ID: HRGMv2_1905_41_5
Type: CAZyme
Location: 4182 - 6335 (-)
Type: CAZyme
Location: 4182 - 6335 (-)
Gene ID: HRGMv2_1905_41_6
Type: TC
Location: 6332 - 7462 (-)
Type: TC
Location: 6332 - 7462 (-)
Gene ID: HRGMv2_1905_41_7
Type: pfam
Location: 7473 - 7640 (-)
Type: pfam
Location: 7473 - 7640 (-)
Gene ID: HRGMv2_1905_41_8
Type: TC
Location: 7653 - 8525 (-)
Type: TC
Location: 7653 - 8525 (-)
Gene ID: HRGMv2_1905_41_9
Type: TC
Location: 8538 - 9434 (-)
Type: TC
Location: 8538 - 9434 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.