Cluster: HRGMv2_1905_CGC30
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1905
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1905_37 | HRGMv2_1905_37_13 | 11848 | 12081 | + | 9.A.8.1.6 |
| TC | HRGMv2_1905_37 | HRGMv2_1905_37_14 | 12071 | 14083 | + | 9.A.8.1.6 |
| pfam | HRGMv2_1905_37 | HRGMv2_1905_37_15 | 14095 | 14736 | + | LUD_dom |
| CAZyme | HRGMv2_1905_37 | HRGMv2_1905_37_16 | 14747 | 16189 | + | GH77 |
Gene ID: HRGMv2_1905_37_13
Type: TC
Location: 11848 - 12081 (+)
Type: TC
Location: 11848 - 12081 (+)
Gene ID: HRGMv2_1905_37_14
Type: TC
Location: 12071 - 14083 (+)
Type: TC
Location: 12071 - 14083 (+)
Gene ID: HRGMv2_1905_37_15
Type: pfam
Location: 14095 - 14736 (+)
Type: pfam
Location: 14095 - 14736 (+)
Gene ID: HRGMv2_1905_37_16
Type: CAZyme
Location: 14747 - 16189 (+)
Type: CAZyme
Location: 14747 - 16189 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.