Cluster: HRGMv2_1905_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1905
- CGC Family ID: CGCFAM_00130
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1905_2 | HRGMv2_1905_2_61 | 65443 | 65757 | - | 2.A.78.1.1 |
| TC | HRGMv2_1905_2 | HRGMv2_1905_2_62 | 65739 | 66437 | - | 2.A.78.1.1 |
| CAZyme | HRGMv2_1905_2 | HRGMv2_1905_2_63 | 66633 | 68273 | - | GH13_29 |
| TC | HRGMv2_1905_2 | HRGMv2_1905_2_64 | 68270 | 70138 | - | 4.A.1.2.13 |
Gene ID: HRGMv2_1905_2_61
Type: TC
Location: 65443 - 65757 (-)
Type: TC
Location: 65443 - 65757 (-)
Gene ID: HRGMv2_1905_2_62
Type: TC
Location: 65739 - 66437 (-)
Type: TC
Location: 65739 - 66437 (-)
Gene ID: HRGMv2_1905_2_63
Type: CAZyme
Location: 66633 - 68273 (-)
Type: CAZyme
Location: 66633 - 68273 (-)
Gene ID: HRGMv2_1905_2_64
Type: TC
Location: 68270 - 70138 (-)
Type: TC
Location: 68270 - 70138 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.