Cluster: HRGMv2_1905_CGC29
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1905
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1905_34 | HRGMv2_1905_34_2 | 504 | 1847 | - | 2.A.23.1.5 |
| pfam | HRGMv2_1905_34 | HRGMv2_1905_34_3 | 1928 | 2539 | - | DUF4230 |
| pfam | HRGMv2_1905_34 | HRGMv2_1905_34_4 | 2672 | 3013 | + | DUF6054 |
| CAZyme | HRGMv2_1905_34 | HRGMv2_1905_34_5 | 3081 | 4280 | - | CE4 |
Gene ID: HRGMv2_1905_34_2
Type: TC
Location: 504 - 1847 (-)
Type: TC
Location: 504 - 1847 (-)
Gene ID: HRGMv2_1905_34_3
Type: pfam
Location: 1928 - 2539 (-)
Type: pfam
Location: 1928 - 2539 (-)
Gene ID: HRGMv2_1905_34_4
Type: pfam
Location: 2672 - 3013 (+)
Type: pfam
Location: 2672 - 3013 (+)
Gene ID: HRGMv2_1905_34_5
Type: CAZyme
Location: 3081 - 4280 (-)
Type: CAZyme
Location: 3081 - 4280 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.