Cluster: HRGMv2_1905_CGC25
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1905
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1905_23 | HRGMv2_1905_23_32 | 33803 | 35083 | - | 2.A.11.2.2 |
| pfam | HRGMv2_1905_23 | HRGMv2_1905_23_33 | 35087 | 36421 | - | FAD_oxidored |
| CAZyme | HRGMv2_1905_23 | HRGMv2_1905_23_34 | 36694 | 38118 | - | GH1 |
Gene ID: HRGMv2_1905_23_32
Type: TC
Location: 33803 - 35083 (-)
Type: TC
Location: 33803 - 35083 (-)
Gene ID: HRGMv2_1905_23_33
Type: pfam
Location: 35087 - 36421 (-)
Type: pfam
Location: 35087 - 36421 (-)
Gene ID: HRGMv2_1905_23_34
Type: CAZyme
Location: 36694 - 38118 (-)
Type: CAZyme
Location: 36694 - 38118 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.