Cluster: HRGMv2_1905_CGC24
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1905
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1905_23 | HRGMv2_1905_23_18 | 16794 | 19439 | - | GH38 |
| TC | HRGMv2_1905_23 | HRGMv2_1905_23_19 | 19449 | 20756 | - | 4.A.3.2.8 |
| pfam | HRGMv2_1905_23 | HRGMv2_1905_23_20 | 20910 | 21329 | - | Acetyltransf_1 | Acetyltransf_7 | Acetyltransf_10 |
| TC | HRGMv2_1905_23 | HRGMv2_1905_23_21 | 21326 | 22444 | - | 2.A.45.2.6 |
Gene ID: HRGMv2_1905_23_18
Type: CAZyme
Location: 16794 - 19439 (-)
Type: CAZyme
Location: 16794 - 19439 (-)
Gene ID: HRGMv2_1905_23_19
Type: TC
Location: 19449 - 20756 (-)
Type: TC
Location: 19449 - 20756 (-)
Gene ID: HRGMv2_1905_23_20
Type: pfam
Location: 20910 - 21329 (-)
Type: pfam
Location: 20910 - 21329 (-)
Gene ID: HRGMv2_1905_23_21
Type: TC
Location: 21326 - 22444 (-)
Type: TC
Location: 21326 - 22444 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.