Cluster: HRGMv2_1905_CGC22
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1905
- CGC Family ID: CGCFAM_00115
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1905_21 | HRGMv2_1905_21_42 | 36290 | 38773 | + | 3.A.3.5.15 |
| pfam | HRGMv2_1905_21 | HRGMv2_1905_21_43 | 38773 | 39036 | + | Trns_repr_metal |
| CAZyme | HRGMv2_1905_21 | HRGMv2_1905_21_44 | 39107 | 40534 | + | GH13_5 |
Gene ID: HRGMv2_1905_21_42
Type: TC
Location: 36290 - 38773 (+)
Type: TC
Location: 36290 - 38773 (+)
Gene ID: HRGMv2_1905_21_43
Type: pfam
Location: 38773 - 39036 (+)
Type: pfam
Location: 38773 - 39036 (+)
Gene ID: HRGMv2_1905_21_44
Type: CAZyme
Location: 39107 - 40534 (+)
Type: CAZyme
Location: 39107 - 40534 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.