Cluster: HRGMv2_1905_CGC21
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1905
- CGC Family ID: CGCFAM_02607
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1905_20 | HRGMv2_1905_20_37 | 33752 | 34786 | - | GH25 |
| peptidase | HRGMv2_1905_20 | HRGMv2_1905_20_38 | 34982 | 36169 | + | C40.UPW |
| TC | HRGMv2_1905_20 | HRGMv2_1905_20_39 | 36717 | 38534 | - | 4.A.2.1.4 |
Gene ID: HRGMv2_1905_20_37
Type: CAZyme
Location: 33752 - 34786 (-)
Type: CAZyme
Location: 33752 - 34786 (-)
Gene ID: HRGMv2_1905_20_38
Type: peptidase
Location: 34982 - 36169 (+)
Type: peptidase
Location: 34982 - 36169 (+)
Gene ID: HRGMv2_1905_20_39
Type: TC
Location: 36717 - 38534 (-)
Type: TC
Location: 36717 - 38534 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.