Cluster: HRGMv2_1905_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: HRGMv2_1905
- CGC Family ID: CGCFAM_00931
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1905_1 | HRGMv2_1905_1_183 | 194104 | 195030 | + | 1.A.35.3.2 |
| TF | HRGMv2_1905_1 | HRGMv2_1905_1_184 | 195025 | 196362 | - | GntR |
| CAZyme | HRGMv2_1905_1 | HRGMv2_1905_1_185 | 196490 | 197818 | + | GH4 |
Gene ID: HRGMv2_1905_1_183
Type: TC
Location: 194104 - 195030 (+)
Type: TC
Location: 194104 - 195030 (+)
Gene ID: HRGMv2_1905_1_184
Type: TF
Location: 195025 - 196362 (-)
Type: TF
Location: 195025 - 196362 (-)
Gene ID: HRGMv2_1905_1_185
Type: CAZyme
Location: 196490 - 197818 (+)
Type: CAZyme
Location: 196490 - 197818 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.