Cluster: HRGMv2_1905_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1905
- CGC Family ID: CGCFAM_02350
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1905_10 | HRGMv2_1905_10_1 | 2 | 298 | - | 2.A.58.2.2 |
| CAZyme | HRGMv2_1905_10 | HRGMv2_1905_10_2 | 534 | 2930 | - | GT35 |
| CAZyme | HRGMv2_1905_10 | HRGMv2_1905_10_3 | 2947 | 4818 | - | CBM48 | GH13_9 |
Gene ID: HRGMv2_1905_10_1
Type: TC
Location: 2 - 298 (-)
Type: TC
Location: 2 - 298 (-)
Gene ID: HRGMv2_1905_10_2
Type: CAZyme
Location: 534 - 2930 (-)
Type: CAZyme
Location: 534 - 2930 (-)
Gene ID: HRGMv2_1905_10_3
Type: CAZyme
Location: 2947 - 4818 (-)
Type: CAZyme
Location: 2947 - 4818 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Allocoprobacillus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.