Cluster: HRGMv2_1901_CGC56
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1901
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1901_37 | HRGMv2_1901_37_1 | 3 | 4718 | + | CBM32 | CBM32 | CBM32 | CBM32 | CBM32 | PL8 |
| pfam | HRGMv2_1901_37 | HRGMv2_1901_37_2 | 4823 | 5377 | + | Pro_CA |
| TC | HRGMv2_1901_37 | HRGMv2_1901_37_3 | 5517 | 6698 | + | 4.A.3.2.2 |
| CAZyme | HRGMv2_1901_37 | HRGMv2_1901_37_4 | 6749 | 8026 | + | GH4 |
Gene ID: HRGMv2_1901_37_1
Type: CAZyme
Location: 3 - 4718 (+)
Type: CAZyme
Location: 3 - 4718 (+)
Gene ID: HRGMv2_1901_37_2
Type: pfam
Location: 4823 - 5377 (+)
Type: pfam
Location: 4823 - 5377 (+)
Gene ID: HRGMv2_1901_37_3
Type: TC
Location: 5517 - 6698 (+)
Type: TC
Location: 5517 - 6698 (+)
Gene ID: HRGMv2_1901_37_4
Type: CAZyme
Location: 6749 - 8026 (+)
Type: CAZyme
Location: 6749 - 8026 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.