Cluster: HRGMv2_1901_CGC54
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1901
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1901_32 | HRGMv2_1901_32_42 | 39367 | 39843 | - | 4.A.1.2.6 |
| CAZyme | HRGMv2_1901_32 | HRGMv2_1901_32_43 | 39845 | 41179 | - | GH4 |
| NULL(UNKNOWN) | HRGMv2_1901_32 | HRGMv2_1901_32_44 | 41200 | 41694 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1901_32 | HRGMv2_1901_32_45 | 41713 | 43260 | - | 4.A.1.1.8 |
Gene ID: HRGMv2_1901_32_42
Type: TC
Location: 39367 - 39843 (-)
Type: TC
Location: 39367 - 39843 (-)
Gene ID: HRGMv2_1901_32_43
Type: CAZyme
Location: 39845 - 41179 (-)
Type: CAZyme
Location: 39845 - 41179 (-)
Gene ID: HRGMv2_1901_32_44
Type:
Location: 41200 - 41694 (-)
Type:
Location: 41200 - 41694 (-)
Gene ID: HRGMv2_1901_32_45
Type: TC
Location: 41713 - 43260 (-)
Type: TC
Location: 41713 - 43260 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.