Cluster: HRGMv2_1901_CGC33
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1901
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1901_13 | HRGMv2_1901_13_101 | 94065 | 97532 | + | GH55_1 |
| pfam | HRGMv2_1901_13 | HRGMv2_1901_13_102 | 97631 | 98431 | + | Hydrolase | S6PP | Hydrolase_3 |
| TC | HRGMv2_1901_13 | HRGMv2_1901_13_103 | 98531 | 98839 | + | 4.A.3.2.2 |
Gene ID: HRGMv2_1901_13_101
Type: CAZyme
Location: 94065 - 97532 (+)
Type: CAZyme
Location: 94065 - 97532 (+)
Gene ID: HRGMv2_1901_13_102
Type: pfam
Location: 97631 - 98431 (+)
Type: pfam
Location: 97631 - 98431 (+)
Gene ID: HRGMv2_1901_13_103
Type: TC
Location: 98531 - 98839 (+)
Type: TC
Location: 98531 - 98839 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| HRGMv2_1901_13_103 | vegan > omnivore | 2.24655 | 0.00574 |