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Cluster: HRGMv2_1901_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1901_12 HRGMv2_1901_12_9 7487 8785 + 4.A.3.2.6
CAZyme HRGMv2_1901_12 HRGMv2_1901_12_10 9396 10490 + GH170
pfam HRGMv2_1901_12 HRGMv2_1901_12_11 10491 11378 + ROK | BcrAD_BadFG
pfam HRGMv2_1901_12 HRGMv2_1901_12_12 11457 12101 + Hydrolase | HAD | Hydrolase_like | HAD_2
TC HRGMv2_1901_12 HRGMv2_1901_12_13 12094 12783 + 2.A.78.1.1
TC HRGMv2_1901_12 HRGMv2_1901_12_14 12776 13090 + 2.A.78.1.1
Gene ID: HRGMv2_1901_12_9
Type: TC
Location: 7487 - 8785 (+)
Gene ID: HRGMv2_1901_12_10
Type: CAZyme
Location: 9396 - 10490 (+)
Gene ID: HRGMv2_1901_12_11
Type: pfam
Location: 10491 - 11378 (+)
Gene ID: HRGMv2_1901_12_12
Type: pfam
Location: 11457 - 12101 (+)
Gene ID: HRGMv2_1901_12_13
Type: TC
Location: 12094 - 12783 (+)
Gene ID: HRGMv2_1901_12_14
Type: TC
Location: 12776 - 13090 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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