Cluster: HRGMv2_1901_CGC15
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1901
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1901_7 | HRGMv2_1901_7_10 | 11391 | 12710 | + | GH4 |
| CAZyme | HRGMv2_1901_7 | HRGMv2_1901_7_11 | 12841 | 14493 | + | GH13_31 |
| TC | HRGMv2_1901_7 | HRGMv2_1901_7_12 | 14695 | 15540 | + | 3.A.1.144.1 |
Gene ID: HRGMv2_1901_7_10
Type: CAZyme
Location: 11391 - 12710 (+)
Type: CAZyme
Location: 11391 - 12710 (+)
Gene ID: HRGMv2_1901_7_11
Type: CAZyme
Location: 12841 - 14493 (+)
Type: CAZyme
Location: 12841 - 14493 (+)
Gene ID: HRGMv2_1901_7_12
Type: TC
Location: 14695 - 15540 (+)
Type: TC
Location: 14695 - 15540 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Coprobacillus
Species
Coprobacillus cateniformis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.