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Cluster: HRGMv2_1901_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1901_5 HRGMv2_1901_5_144 141625 141948 + 4.A.3.2.8
pfam HRGMv2_1901_5 HRGMv2_1901_5_145 142002 142358 - DUF5684
pfam HRGMv2_1901_5 HRGMv2_1901_5_146 142661 145330 - Aldedh | Fe-ADH | Fe-ADH_2 | ADH_Fe_C
TC HRGMv2_1901_5 HRGMv2_1901_5_147 145471 146412 - 2.A.19.5.2
TC HRGMv2_1901_5 HRGMv2_1901_5_148 146590 147876 - 2.A.26.1.1
pfam HRGMv2_1901_5 HRGMv2_1901_5_149 147926 148855 - Mem_trans | Mem_trans
CAZyme HRGMv2_1901_5 HRGMv2_1901_5_150 148955 150424 - GH1
Gene ID: HRGMv2_1901_5_144
Type: TC
Location: 141625 - 141948 (+)
Gene ID: HRGMv2_1901_5_145
Type: pfam
Location: 142002 - 142358 (-)
Gene ID: HRGMv2_1901_5_146
Type: pfam
Location: 142661 - 145330 (-)
Gene ID: HRGMv2_1901_5_147
Type: TC
Location: 145471 - 146412 (-)
Gene ID: HRGMv2_1901_5_148
Type: TC
Location: 146590 - 147876 (-)
Gene ID: HRGMv2_1901_5_149
Type: pfam
Location: 147926 - 148855 (-)
Gene ID: HRGMv2_1901_5_150
Type: CAZyme
Location: 148955 - 150424 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1901_5_150 vegan > omnivore 1.39554 0.00574
HRGMv2_1901_5_150 vegetarian > omnivore 2.01497 0.03132

🧭 Explore Read Mapping of CGC

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