Cluster: HRGMv2_1896_CGC9
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1896
- CGC Family ID: CGCFAM_00070
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1896_12 | HRGMv2_1896_12_16 | 21942 | 23315 | - | 2.A.50.2.1 |
| pfam | HRGMv2_1896_12 | HRGMv2_1896_12_17 | 23324 | 23806 | - | DUF4358 |
| NULL(UNKNOWN) | HRGMv2_1896_12 | HRGMv2_1896_12_18 | 23892 | 24245 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1896_12 | HRGMv2_1896_12_19 | 24418 | 25866 | - | 2.A.66.2.22 |
| CAZyme | HRGMv2_1896_12 | HRGMv2_1896_12_20 | 25881 | 26825 | - | GT2 |
Gene ID: HRGMv2_1896_12_16
Type: TC
Location: 21942 - 23315 (-)
Type: TC
Location: 21942 - 23315 (-)
Gene ID: HRGMv2_1896_12_17
Type: pfam
Location: 23324 - 23806 (-)
Type: pfam
Location: 23324 - 23806 (-)
Gene ID: HRGMv2_1896_12_18
Type:
Location: 23892 - 24245 (-)
Type:
Location: 23892 - 24245 (-)
Gene ID: HRGMv2_1896_12_19
Type: TC
Location: 24418 - 25866 (-)
Type: TC
Location: 24418 - 25866 (-)
Gene ID: HRGMv2_1896_12_20
Type: CAZyme
Location: 25881 - 26825 (-)
Type: CAZyme
Location: 25881 - 26825 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella sp003458715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.