dbCAN Logo

Cluster: HRGMv2_1896_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1896_9 HRGMv2_1896_9_20 19432 20652 + 2.A.49.9.3
pfam HRGMv2_1896_9 HRGMv2_1896_9_21 20767 21906 + NTP_transferase | Hexapep_GlmU
pfam HRGMv2_1896_9 HRGMv2_1896_9_22 21909 23024 + NTP_transferase | Hexapep_GlmU
CAZyme HRGMv2_1896_9 HRGMv2_1896_9_23 23024 24463 + GT5
pfam HRGMv2_1896_9 HRGMv2_1896_9_24 24463 24888 + 2-thiour_desulf
TC HRGMv2_1896_9 HRGMv2_1896_9_25 24950 25216 + 8.A.8.1.3
Gene ID: HRGMv2_1896_9_20
Type: TC
Location: 19432 - 20652 (+)
Gene ID: HRGMv2_1896_9_21
Type: pfam
Location: 20767 - 21906 (+)
Gene ID: HRGMv2_1896_9_22
Type: pfam
Location: 21909 - 23024 (+)
Gene ID: HRGMv2_1896_9_23
Type: CAZyme
Location: 23024 - 24463 (+)
Gene ID: HRGMv2_1896_9_24
Type: pfam
Location: 24463 - 24888 (+)
Gene ID: HRGMv2_1896_9_25
Type: TC
Location: 24950 - 25216 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_1896_9_24 vegetarian > omnivore 2.05718 0.01332
HRGMv2_1896_9_25 vegan > omnivore 3.08328 0.01604
HRGMv2_1896_9_25 vegetarian > omnivore 3.25544 0.01332

🧭 Explore Read Mapping of CGC

← Back to Cluster List