Cluster: HRGMv2_1896_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1896
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1896_2 | HRGMv2_1896_2_1 | 33 | 1385 | - | 2.A.66.1.33 |
| pfam | HRGMv2_1896_2 | HRGMv2_1896_2_2 | 1420 | 2361 | - | Ldh_1_N | Ldh_1_C |
| TC | HRGMv2_1896_2 | HRGMv2_1896_2_3 | 2373 | 3731 | - | 2.A.22.5.3 |
| CAZyme | HRGMv2_1896_2 | HRGMv2_1896_2_4 | 3728 | 4513 | - | GT8 |
Gene ID: HRGMv2_1896_2_1
Type: TC
Location: 33 - 1385 (-)
Type: TC
Location: 33 - 1385 (-)
Gene ID: HRGMv2_1896_2_2
Type: pfam
Location: 1420 - 2361 (-)
Type: pfam
Location: 1420 - 2361 (-)
Gene ID: HRGMv2_1896_2_3
Type: TC
Location: 2373 - 3731 (-)
Type: TC
Location: 2373 - 3731 (-)
Gene ID: HRGMv2_1896_2_4
Type: CAZyme
Location: 3728 - 4513 (-)
Type: CAZyme
Location: 3728 - 4513 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella sp003458715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.