Cluster: HRGMv2_1896_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1896
- CGC Family ID: CGCFAM_09888
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1896_47 | HRGMv2_1896_47_9 | 6704 | 8098 | + | GH4 |
| NULL(UNKNOWN) | HRGMv2_1896_47 | HRGMv2_1896_47_10 | 8088 | 8318 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1896_47 | HRGMv2_1896_47_11 | 8318 | 8785 | + | 4.A.1.1.1 |
| TC | HRGMv2_1896_47 | HRGMv2_1896_47_12 | 8912 | 9766 | - | 2.A.115.1.5 |
Gene ID: HRGMv2_1896_47_9
Type: CAZyme
Location: 6704 - 8098 (+)
Type: CAZyme
Location: 6704 - 8098 (+)
Gene ID: HRGMv2_1896_47_10
Type:
Location: 8088 - 8318 (+)
Type:
Location: 8088 - 8318 (+)
Gene ID: HRGMv2_1896_47_11
Type: TC
Location: 8318 - 8785 (+)
Type: TC
Location: 8318 - 8785 (+)
Gene ID: HRGMv2_1896_47_12
Type: TC
Location: 8912 - 9766 (-)
Type: TC
Location: 8912 - 9766 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella sp003458715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.