Cluster: HRGMv2_1896_CGC11
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1896
- CGC Family ID: CGCFAM_00105
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1896_16 | HRGMv2_1896_16_1 | 89 | 2530 | - | GT2 | GT2 |
| TC | HRGMv2_1896_16 | HRGMv2_1896_16_2 | 2607 | 3389 | - | 3.A.1.103.4 |
| TC | HRGMv2_1896_16 | HRGMv2_1896_16_3 | 3401 | 4531 | - | 3.A.1.103.4 |
Gene ID: HRGMv2_1896_16_1
Type: CAZyme
Location: 89 - 2530 (-)
Type: CAZyme
Location: 89 - 2530 (-)
Gene ID: HRGMv2_1896_16_2
Type: TC
Location: 2607 - 3389 (-)
Type: TC
Location: 2607 - 3389 (-)
Gene ID: HRGMv2_1896_16_3
Type: TC
Location: 3401 - 4531 (-)
Type: TC
Location: 3401 - 4531 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella sp003458715
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.