Cluster: HRGMv2_1892_CGC13
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1892
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1892_35 | HRGMv2_1892_35_7 | 4196 | 5530 | - | 2.A.66.1.33 |
| pfam | HRGMv2_1892_35 | HRGMv2_1892_35_8 | 5568 | 6509 | - | Ldh_1_N | Ldh_1_C |
| TC | HRGMv2_1892_35 | HRGMv2_1892_35_9 | 6521 | 7879 | - | 2.A.22.5.3 |
| CAZyme | HRGMv2_1892_35 | HRGMv2_1892_35_10 | 7876 | 8661 | - | GT8 |
Gene ID: HRGMv2_1892_35_7
Type: TC
Location: 4196 - 5530 (-)
Type: TC
Location: 4196 - 5530 (-)
Gene ID: HRGMv2_1892_35_8
Type: pfam
Location: 5568 - 6509 (-)
Type: pfam
Location: 5568 - 6509 (-)
Gene ID: HRGMv2_1892_35_9
Type: TC
Location: 6521 - 7879 (-)
Type: TC
Location: 6521 - 7879 (-)
Gene ID: HRGMv2_1892_35_10
Type: CAZyme
Location: 7876 - 8661 (-)
Type: CAZyme
Location: 7876 - 8661 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Erysipelotrichaceae
Genus
Holdemanella
Species
Holdemanella porci
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.