Cluster: HRGMv2_1888_CGC7
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1888
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1888_21 | HRGMv2_1888_21_1 | 273 | 3113 | + | GH63 |
| TC | HRGMv2_1888_21 | HRGMv2_1888_21_2 | 3157 | 4299 | - | 9.B.141.1.1 |
| pfam | HRGMv2_1888_21 | HRGMv2_1888_21_3 | 4350 | 6683 | - | Metallophos | FIVAR | Pur_ac_phosph_N |
| TF | HRGMv2_1888_21 | HRGMv2_1888_21_4 | 6884 | 7327 | + | Fe_dep_repress |
| TC | HRGMv2_1888_21 | HRGMv2_1888_21_5 | 7328 | 8662 | + | 2.A.66.1.28 |
Gene ID: HRGMv2_1888_21_1
Type: CAZyme
Location: 273 - 3113 (+)
Type: CAZyme
Location: 273 - 3113 (+)
Gene ID: HRGMv2_1888_21_2
Type: TC
Location: 3157 - 4299 (-)
Type: TC
Location: 3157 - 4299 (-)
Gene ID: HRGMv2_1888_21_3
Type: pfam
Location: 4350 - 6683 (-)
Type: pfam
Location: 4350 - 6683 (-)
Gene ID: HRGMv2_1888_21_4
Type: TF
Location: 6884 - 7327 (+)
Type: TF
Location: 6884 - 7327 (+)
Gene ID: HRGMv2_1888_21_5
Type: TC
Location: 7328 - 8662 (+)
Type: TC
Location: 7328 - 8662 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium sp900540685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.