Cluster: HRGMv2_1888_CGC24
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1888
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1888_124 | HRGMv2_1888_124_3 | 2141 | 2740 | - | 2.A.87.2.3 |
| TF | HRGMv2_1888_124 | HRGMv2_1888_124_4 | 2919 | 3797 | - | HTH_6 |
| CAZyme | HRGMv2_1888_124 | HRGMv2_1888_124_5 | 3956 | 5335 | + | GH1 |
Gene ID: HRGMv2_1888_124_3
Type: TC
Location: 2141 - 2740 (-)
Type: TC
Location: 2141 - 2740 (-)
Gene ID: HRGMv2_1888_124_4
Type: TF
Location: 2919 - 3797 (-)
Type: TF
Location: 2919 - 3797 (-)
Gene ID: HRGMv2_1888_124_5
Type: CAZyme
Location: 3956 - 5335 (+)
Type: CAZyme
Location: 3956 - 5335 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium sp900540685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.