Cluster: HRGMv2_1888_CGC22
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1888
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1888_106 | HRGMv2_1888_106_2 | 1173 | 1493 | + | 4.A.3.1.2 |
| TC | HRGMv2_1888_106 | HRGMv2_1888_106_3 | 1493 | 3154 | + | 4.A.3.1.1 |
| CAZyme | HRGMv2_1888_106 | HRGMv2_1888_106_4 | 3159 | 4559 | + | GH1 |
Gene ID: HRGMv2_1888_106_2
Type: TC
Location: 1173 - 1493 (+)
Type: TC
Location: 1173 - 1493 (+)
Gene ID: HRGMv2_1888_106_3
Type: TC
Location: 1493 - 3154 (+)
Type: TC
Location: 1493 - 3154 (+)
Gene ID: HRGMv2_1888_106_4
Type: CAZyme
Location: 3159 - 4559 (+)
Type: CAZyme
Location: 3159 - 4559 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium sp900540685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.