Cluster: HRGMv2_1888_CGC17
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1888
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1888_79 | HRGMv2_1888_79_3 | 1518 | 2321 | + | 3.A.1.104.1 |
| TC | HRGMv2_1888_79 | HRGMv2_1888_79_4 | 2330 | 3148 | + | 3.A.1.104.2 |
| CAZyme | HRGMv2_1888_79 | HRGMv2_1888_79_5 | 3199 | 5433 | + | GT2 |
Gene ID: HRGMv2_1888_79_3
Type: TC
Location: 1518 - 2321 (+)
Type: TC
Location: 1518 - 2321 (+)
Gene ID: HRGMv2_1888_79_4
Type: TC
Location: 2330 - 3148 (+)
Type: TC
Location: 2330 - 3148 (+)
Gene ID: HRGMv2_1888_79_5
Type: CAZyme
Location: 3199 - 5433 (+)
Type: CAZyme
Location: 3199 - 5433 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium sp900540685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.