Cluster: HRGMv2_1888_CGC16
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1888
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1888_78 | HRGMv2_1888_78_4 | 2970 | 5099 | + | 4.A.1.1.11 |
| pfam | HRGMv2_1888_78 | HRGMv2_1888_78_5 | 5102 | 5905 | + | Exo_endo_phos |
| CAZyme | HRGMv2_1888_78 | HRGMv2_1888_78_6 | 5902 | 7386 | + | GH77 |
| CAZyme | HRGMv2_1888_78 | HRGMv2_1888_78_7 | 7401 | 9668 | + | GT35 |
Gene ID: HRGMv2_1888_78_4
Type: TC
Location: 2970 - 5099 (+)
Type: TC
Location: 2970 - 5099 (+)
Gene ID: HRGMv2_1888_78_5
Type: pfam
Location: 5102 - 5905 (+)
Type: pfam
Location: 5102 - 5905 (+)
Gene ID: HRGMv2_1888_78_6
Type: CAZyme
Location: 5902 - 7386 (+)
Type: CAZyme
Location: 5902 - 7386 (+)
Gene ID: HRGMv2_1888_78_7
Type: CAZyme
Location: 7401 - 9668 (+)
Type: CAZyme
Location: 7401 - 9668 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium sp900540685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.