Cluster: HRGMv2_1888_CGC14
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1888
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1888_62 | HRGMv2_1888_62_4 | 2273 | 7468 | - | CBM32 | CBM32 | CBM32 | CBM32 | GH20 |
| NULL(UNKNOWN) | HRGMv2_1888_62 | HRGMv2_1888_62_5 | 7645 | 7794 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1888_62 | HRGMv2_1888_62_6 | 7807 | 10557 | - | 3.A.3.4.1 |
| pfam | HRGMv2_1888_62 | HRGMv2_1888_62_7 | 10570 | 10875 | - | DUF3784 |
| TC | HRGMv2_1888_62 | HRGMv2_1888_62_8 | 10890 | 11567 | - | 9.B.20.1.2 |
Gene ID: HRGMv2_1888_62_4
Type: CAZyme
Location: 2273 - 7468 (-)
Type: CAZyme
Location: 2273 - 7468 (-)
Gene ID: HRGMv2_1888_62_5
Type:
Location: 7645 - 7794 (-)
Type:
Location: 7645 - 7794 (-)
Gene ID: HRGMv2_1888_62_6
Type: TC
Location: 7807 - 10557 (-)
Type: TC
Location: 7807 - 10557 (-)
Gene ID: HRGMv2_1888_62_7
Type: pfam
Location: 10570 - 10875 (-)
Type: pfam
Location: 10570 - 10875 (-)
Gene ID: HRGMv2_1888_62_8
Type: TC
Location: 10890 - 11567 (-)
Type: TC
Location: 10890 - 11567 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium sp900540685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.