Cluster: HRGMv2_1888_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1888
- Continent: Africa
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1888_5 | HRGMv2_1888_5_7 | 6108 | 7538 | + | GH1 |
| NULL(UNKNOWN) | HRGMv2_1888_5 | HRGMv2_1888_5_8 | 7605 | 8453 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_1888_5 | HRGMv2_1888_5_9 | 8477 | 10333 | - | 3.A.1.120.6 |
Gene ID: HRGMv2_1888_5_7
Type: CAZyme
Location: 6108 - 7538 (+)
Type: CAZyme
Location: 6108 - 7538 (+)
Gene ID: HRGMv2_1888_5_8
Type:
Location: 7605 - 8453 (+)
Type:
Location: 7605 - 8453 (+)
Gene ID: HRGMv2_1888_5_9
Type: TC
Location: 8477 - 10333 (-)
Type: TC
Location: 8477 - 10333 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_I
Class
Bacilli_A
Order
Erysipelotrichales
Family
Coprobacillaceae
Genus
Catenibacterium
Species
Catenibacterium sp900540685
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.