dbCAN Logo

Cluster: HRGMv2_1881_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1881_1 HRGMv2_1881_1_67 80355 81314 + GT2
pfam HRGMv2_1881_1 HRGMv2_1881_1_68 81307 81963 + Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31
TC HRGMv2_1881_1 HRGMv2_1881_1_69 81960 82808 + 9.B.102.7.10
NULL(UNKNOWN) HRGMv2_1881_1 HRGMv2_1881_1_70 82808 84592 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1881_1 HRGMv2_1881_1_71 84954 86315 + 2.A.3.1.14
TC HRGMv2_1881_1 HRGMv2_1881_1_72 86491 87546 + 9.B.102.1.2
TC HRGMv2_1881_1 HRGMv2_1881_1_73 87563 87790 + 9.B.102.1.12
Gene ID: HRGMv2_1881_1_67
Type: CAZyme
Location: 80355 - 81314 (+)
Gene ID: HRGMv2_1881_1_68
Type: pfam
Location: 81307 - 81963 (+)
Gene ID: HRGMv2_1881_1_69
Type: TC
Location: 81960 - 82808 (+)
Gene ID: HRGMv2_1881_1_70
Type:
Location: 82808 - 84592 (+)
Gene ID: HRGMv2_1881_1_71
Type: TC
Location: 84954 - 86315 (+)
Gene ID: HRGMv2_1881_1_72
Type: TC
Location: 86491 - 87546 (+)
Gene ID: HRGMv2_1881_1_73
Type: TC
Location: 87563 - 87790 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List