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PROTEIN: HRGMv2_1881_1_70

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Protein File & Metadata
Download PDB File
Source:
HRGMv2_1881_1_70.pdb
Genome ID:
HRGMv2_1881
Protein ID:
HRGMv2_1881_1_70

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Detailed structural information will appear here after analysis...

Protein Sequence 
MNQIRNSRVI   NKDSVTLVTL   LALFLCVSSG   YLLSYQFRDF   PDGIAHMGYV   YDVIREGFPD 60
YRSGLYSTGE   KYNHLNHPAL   YYLLSGYIVR   LFSLQHHAVL   VAQLVNMVIG   SLIILITFRT 120
LKRVGCSSGA   IFAGMTIFML   LPMFPLLCAS   VSNDPISFLG   CSVFLYALIS   VKQEQASRRI 180
LAGLFIGGAI   AALSKATAAL   AIICMFAVHF   LIYMRAWTTF   IKHSRRSDYF   IPALSLIAVL 240
SYYIVIHHIY   GAFFPSPQKG   PDVMFQTMNP   AAERLGLVDY   IKLFFNANLF   SLTQPYGHVE 300
FEDSLLRVDL   LKWLLLGLSI   GVVMLTSLTK   AKTEAQRASL   AMMIAFILFV   VFYFIALRKL 360
HLQTGYQGAL   QARYFFGFLS   AFALCIAVAF   DLIKSNILRS   VSLLVITAMT   LANVYPSWIR 420
VYAYPGVMDR   MYIAQNSFYI   NYGGLAKGRI   FQQSFTALSA   HLLKAGMMIG   TYSRVDHSTL 480
NVSLLTMEGD   ILYQHAIDAS   TIADNSWVEV   SFPAIELKPG   GHYLLQLTSP   DANENTFVTW 540
WAAKRDTTEY   PGYAGSKNGP   VVYDFYSGGD   AIVDGQLQKD   SDFAFKLYFG   EAAK 594
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q9HUZ2-F1-model_v4 10 587 4 468 0.6139 0.7102
AF-Q8ZP99-F1-model_v4 8 587 15 500 0.5987 0.6904
AF-K0EYW2-F1-model_v4 9 507 22 495 0.5861 0.682
AF-A0A0R4IE52-F1-model_v4 7 587 1 486 0.5809 0.6613
AF-K0F7B2-F1-model_v4 11 581 9 474 0.5809 0.6806
AF-Q9CD61-F1-model_v4 9 507 17 503 0.5804 0.6641
AF-Q8ZR61-F1-model_v4 7 586 2 516 0.5778 0.6535
AF-K0EMC6-F1-model_v4 3 588 40 528 0.5749 0.667
AF-P9WN05-F1-model_v4 9 507 39 515 0.5748 0.6774
AF-X8F0H0-F1-model_v4 9 507 35 510 0.5731 0.6737
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A1S6H5E4-F1-model_v4 GT39 9 506 1 406 0.6509 0.7893
AF-A0A858Q705-F1-model_v4 GT39 8 507 26 438 0.6319 0.7864
AF-A0A0F7XTI1-F1-model_v4 GT83 6 585 2 460 0.6261 0.728
AF-C6XQ09-F1-model_v4 GT39 11 507 11 423 0.6235 0.7619
AF-A0A1H0R8U6-F1-model_v4 GT83 4 587 1 461 0.6229 0.7212
AF-A0A4P6G6D4-F1-model_v4 GT83 4 587 1 461 0.6226 0.7211
AF-A0A0S4I0A8-F1-model_v4 GT83 9 587 4 457 0.622 0.7281
AF-A0A1H2NZM3-F1-model_v4 GT83 9 587 4 457 0.6199 0.7258
AF-A0A2Z4RGP7-F1-model_v4 GT83 10 587 8 461 0.6163 0.7231
AF-A0A1B3ECB2-F1-model_v4 GT83 10 587 6 459 0.6154 0.7261
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A1S6H5E4 GT39 9 506 1 406 0.6509 0.7893
W6RYW5 GT83 7 434 10 376 0.6446 0.817
A5GCG9 GT39 11 566 7 414 0.6356 0.7699
A0A0B5BD88 GT39 10 579 1 417 0.6334 0.7708
W0AAL2 GT39 7 584 10 420 0.6333 0.7676
D1CEC5 GT39 8 507 15 433 0.6265 0.7648
A0A0F7XTI1 GT83 6 585 2 460 0.6261 0.728
A0A6F9WZW7 GT39 9 584 12 424 0.6254 0.7589
C6XQ09 GT39 11 507 11 423 0.6235 0.7619
A0A518B1V8 GT83 4 560 7 479 0.6234 0.7204
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
5f15-assembly1.cif.gz_A 9 584 1 528 0.5576 0.6097
6ftg-assembly1.cif.gz_5 2 585 2 636 0.517 0.559
7bvg-assembly1.cif.gz_A 9 589 232 1040 0.4854 0.6404
7bvh-assembly1.cif.gz_A 11 588 245 998 0.4809 0.6286
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q1MJ97-F1-model_v4 8 590 4 480 0.6011 0.6899
AF-Q1MLH5-F1-model_v4 11 586 1 455 0.5958 0.6985
AF-O67270-F1-model_v4 11 587 1 490 0.5896 0.6629
AF-Q48HY9-F1-model_v4 10 581 1 524 0.5811 0.6355
AF-Q8NRZ6-F1-model_v4 9 507 30 513 0.5798 0.6721
AF-Q7N3Q9-F1-model_v4 7 585 1 544 0.5774 0.6209
AF-L8F4Z2-F1-model_v4 9 507 33 509 0.5761 0.6749
AF-B4ETL9-F1-model_v4 7 585 1 544 0.5756 0.6197
AF-P9WN05-F1-model_v4 9 507 39 515 0.5748 0.6774
AF-P9WN04-F1-model_v4 9 507 39 515 0.5746 0.6771
Download Full SwissProt Results