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Cluster: HRGMv2_1821_CGC34

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1821_22 HRGMv2_1821_22_53 52151 52588 - 1.E.55.2.1
NULL(UNKNOWN) HRGMv2_1821_22 HRGMv2_1821_22_54 52989 53330 + NULL(UNKNOWN)
[View Structural Homologs]
NULL(UNKNOWN) HRGMv2_1821_22 HRGMv2_1821_22_55 53402 53959 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_1821_22 HRGMv2_1821_22_56 54216 55334 - 3.A.1.1.4
TC HRGMv2_1821_22 HRGMv2_1821_22_57 55659 56879 + 3.A.1.1.2
TC HRGMv2_1821_22 HRGMv2_1821_22_58 56879 58228 + 3.A.1.1.2
TC HRGMv2_1821_22 HRGMv2_1821_22_59 58239 59090 + 3.A.1.1.2
CAZyme HRGMv2_1821_22 HRGMv2_1821_22_60 59094 60287 + GH53
CAZyme HRGMv2_1821_22 HRGMv2_1821_22_61 60329 62410 + GH42
TC HRGMv2_1821_22 HRGMv2_1821_22_62 63088 63411 + 4.A.1.1.1
TC HRGMv2_1821_22 HRGMv2_1821_22_63 63495 64757 - 1.B.3.1.1
Gene ID: HRGMv2_1821_22_53
Type: TC
Location: 52151 - 52588 (-)
Gene ID: HRGMv2_1821_22_54
Type:
Location: 52989 - 53330 (+)
Gene ID: HRGMv2_1821_22_55
Type:
Location: 53402 - 53959 (+)
Gene ID: HRGMv2_1821_22_56
Type: TC
Location: 54216 - 55334 (-)
Gene ID: HRGMv2_1821_22_57
Type: TC
Location: 55659 - 56879 (+)
Gene ID: HRGMv2_1821_22_58
Type: TC
Location: 56879 - 58228 (+)
Gene ID: HRGMv2_1821_22_59
Type: TC
Location: 58239 - 59090 (+)
Gene ID: HRGMv2_1821_22_60
Type: CAZyme
Location: 59094 - 60287 (+)
Gene ID: HRGMv2_1821_22_61
Type: CAZyme
Location: 60329 - 62410 (+)
Gene ID: HRGMv2_1821_22_62
Type: TC
Location: 63088 - 63411 (+)
Gene ID: HRGMv2_1821_22_63
Type: TC
Location: 63495 - 64757 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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