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PROTEIN: HRGMv2_1821_22_55

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Protein File & Metadata
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Source:
HRGMv2_1821_22_55.pdb
Genome ID:
HRGMv2_1821
Protein ID:
HRGMv2_1821_22_55

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Protein Sequence 
MKLRQSLNIM   GALCLTAALG   STPMIASAAE   AKTAQAANTQ   TQTISLLDGK   QTFKLQGYEK 60
QPVPGGGPGT   MYVNKQEKRV   LIIGEEEIPV   IARGGSDADF   LEGGKSIKDK   QKQASPSYTV 120
ISEKTENANG   LPVYHIEATD   KMGGNDVQQA   TLLAAANKKF   TVIQVVSNHK   DKAGHLKAVN 180
NILGK 185
Protein Structure Viewer
Confidence Score (pLDDT)
Very Low (<50)
Low (50-70)
High (70-90)
Very High (>90)
Low Confidence
High Confidence
Structural Homologs - AFDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-Q32AR2-F1-model_v4 9 185 1 200 0.656 0.7433
AF-A0A0H3GUE1-F1-model_v4 36 185 34 182 0.6274 0.7944
AF-Q7CPJ3-F1-model_v4 39 185 39 182 0.6198 0.8086
AF-P0AEE1-F1-model_v4 39 185 39 181 0.6157 0.8088
AF-I1JDS1-F1-model_v4 3 185 9 243 0.5903 0.706
AF-I1NJ53-F1-model_v4 1 185 1 226 0.5508 0.6344
AF-O53780-F1-model_v4 9 185 49 223 0.5507 0.6594
AF-O33075-F1-model_v4 1 184 14 262 0.5506 0.6843
AF-Q0JGA3-F1-model_v4 52 185 1 174 0.5489 0.7533
AF-P82538-F1-model_v4 39 185 80 226 0.5427 0.762
Download Full AFDB Results
Structural Homologs - CAZyme3D-Whole
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
AF-A0A160T778-F1-model_v4 GT4 39 185 35 192 0.5856 0.7668
AF-F6DP34-F1-model_v4 GH26 39 185 23 165 0.4096 0.766
AF-A0A6I5ZPC2-F1-model_v4 GH26 38 185 46 185 0.4074 0.7782
AF-A0A1W1W1Q9-F1-model_v4 GH26 6 185 24 203 0.4028 0.6224
AF-U5W762-F1-model_v4 CBM13 2 185 102 520 0.4026 0.6482
AF-A0A7M1PZR2-F1-model_v4 GH26 37 185 51 192 0.3731 0.6998
Download Full CAZyme3D-Whole Results
Structural Homologs - CAZyme-ID50
Target CAZyme Family Q-Start Q-End T-Start T-End Avg TM Align TM
A0A160T778 GT4 39 185 35 192 0.5856 0.7668
F6DP34 GH26 39 185 23 165 0.4096 0.766
A0A1W1W1Q9 GH26 6 185 24 203 0.4028 0.6224
U5W762 CBM13 2 185 102 520 0.4026 0.6482
A0A7S7J103 GH26 6 185 1 240 0.3965 0.6228
A0A1C3N346 CBM13 1 185 338 525 0.3926 0.6284
A0A975J5C0 GH26 38 185 51 194 0.3926 0.7342
Download Full CAZyme-ID50 Results
Structural Homologs - PDB
Target Q-Start Q-End T-Start T-End Avg TM Align TM
2xb3-assembly1.cif.gz_A 39 185 2 152 0.6521 0.7757
2lnj-assembly1.cif.gz_A 37 185 11 167 0.6337 0.7756
2vu4-assembly1.cif.gz_A 39 185 2 145 0.6312 0.75
3jcu-assembly1.cif.gz_p 37 184 2 171 0.5966 0.738
6e8a-assembly2.cif.gz_B-2 13 185 17 141 0.5858 0.7721
6kac-assembly1.cif.gz_p 39 184 17 187 0.5834 0.7588
3lyd-assembly1.cif.gz_A 47 185 14 152 0.5772 0.7285
6e8a-assembly1.cif.gz_A-3 13 184 19 147 0.5723 0.7454
Download Full PDB Results
Structural Homologs - SwissProt
Target Q-Start Q-End T-Start T-End Avg TM Align TM
AF-P0AEE2-F1-model_v4 23 185 2 182 0.6455 0.7555
AF-P0AEE1-F1-model_v4 39 185 39 181 0.6157 0.8088
AF-P29979-F1-model_v4 14 185 1 174 0.6022 0.6812
AF-O53780-F1-model_v4 9 185 49 223 0.5507 0.6594
AF-O33075-F1-model_v4 1 184 14 262 0.5506 0.6843
AF-Q96334-F1-model_v4 38 184 47 216 0.547 0.7496
AF-P82538-F1-model_v4 39 185 80 226 0.5427 0.762
AF-O80634-F1-model_v4 39 185 87 233 0.5312 0.7556
AF-P9WK59-F1-model_v4 9 185 61 221 0.5264 0.6786
AF-O23403-F1-model_v4 5 185 23 282 0.5197 0.6616
Download Full SwissProt Results