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Cluster: HRGMv2_1819_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_1819_37 HRGMv2_1819_37_1 178 1245 - GH105
sulfatase HRGMv2_1819_37 HRGMv2_1819_37_2 1263 2018 - S1_2
pfam HRGMv2_1819_37 HRGMv2_1819_37_3 2086 2916 - KduI
CAZyme HRGMv2_1819_37 HRGMv2_1819_37_4 2954 4126 - CE9
TC HRGMv2_1819_37 HRGMv2_1819_37_5 4123 4554 - 4.A.6.1.16
TC HRGMv2_1819_37 HRGMv2_1819_37_6 4617 5504 - 4.A.6.1.4
TC HRGMv2_1819_37 HRGMv2_1819_37_7 5494 6264 - 4.A.6.1.4
TC HRGMv2_1819_37 HRGMv2_1819_37_8 6313 6807 - 4.A.6.1.4
Gene ID: HRGMv2_1819_37_1
Type: CAZyme
Location: 178 - 1245 (-)
Gene ID: HRGMv2_1819_37_2
Type: sulfatase
Location: 1263 - 2018 (-)
Gene ID: HRGMv2_1819_37_3
Type: pfam
Location: 2086 - 2916 (-)
Gene ID: HRGMv2_1819_37_4
Type: CAZyme
Location: 2954 - 4126 (-)
Gene ID: HRGMv2_1819_37_5
Type: TC
Location: 4123 - 4554 (-)
Gene ID: HRGMv2_1819_37_6
Type: TC
Location: 4617 - 5504 (-)
Gene ID: HRGMv2_1819_37_7
Type: TC
Location: 5494 - 6264 (-)
Gene ID: HRGMv2_1819_37_8
Type: TC
Location: 6313 - 6807 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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