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Cluster: HRGMv2_1815_CGC40

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1815_13 HRGMv2_1815_13_57 65291 66409 - 3.A.1.1.4
TC HRGMv2_1815_13 HRGMv2_1815_13_58 66733 67953 + 3.A.1.1.2
TC HRGMv2_1815_13 HRGMv2_1815_13_59 67996 69303 + 3.A.1.1.2
TC HRGMv2_1815_13 HRGMv2_1815_13_60 69314 70165 + 3.A.1.1.2
CAZyme HRGMv2_1815_13 HRGMv2_1815_13_61 70169 71362 + GH53
CAZyme HRGMv2_1815_13 HRGMv2_1815_13_62 71413 73485 + GH42
TC HRGMv2_1815_13 HRGMv2_1815_13_63 73865 74179 + 4.A.1.1.1
TC HRGMv2_1815_13 HRGMv2_1815_13_64 74266 75528 - 1.B.3.1.1
Gene ID: HRGMv2_1815_13_57
Type: TC
Location: 65291 - 66409 (-)
Gene ID: HRGMv2_1815_13_58
Type: TC
Location: 66733 - 67953 (+)
Gene ID: HRGMv2_1815_13_59
Type: TC
Location: 67996 - 69303 (+)
Gene ID: HRGMv2_1815_13_60
Type: TC
Location: 69314 - 70165 (+)
Gene ID: HRGMv2_1815_13_61
Type: CAZyme
Location: 70169 - 71362 (+)
Gene ID: HRGMv2_1815_13_62
Type: CAZyme
Location: 71413 - 73485 (+)
Gene ID: HRGMv2_1815_13_63
Type: TC
Location: 73865 - 74179 (+)
Gene ID: HRGMv2_1815_13_64
Type: TC
Location: 74266 - 75528 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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