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Cluster: HRGMv2_1815_CGC22

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1815_6 HRGMv2_1815_6_185 207935 208666 - 3.A.1.12.15
TC HRGMv2_1815_6 HRGMv2_1815_6_186 208654 209601 - 3.A.1.12.15
TC HRGMv2_1815_6 HRGMv2_1815_6_187 209594 210769 - 3.A.1.12.15
TC HRGMv2_1815_6 HRGMv2_1815_6_188 210773 211684 - 3.A.1.12.15
TC HRGMv2_1815_6 HRGMv2_1815_6_189 212039 213514 + 2.A.1.1.95
STP HRGMv2_1815_6 HRGMv2_1815_6_190 213712 214239 - NUDIX
TC HRGMv2_1815_6 HRGMv2_1815_6_191 214388 216283 - 1.B.52.2.2
pfam HRGMv2_1815_6 HRGMv2_1815_6_192 216461 217570 - SUFU
pfam HRGMv2_1815_6 HRGMv2_1815_6_193 217786 218661 - MPAB_Lcp_cat
CAZyme HRGMv2_1815_6 HRGMv2_1815_6_194 218743 221040 - GH3
Gene ID: HRGMv2_1815_6_185
Type: TC
Location: 207935 - 208666 (-)
Gene ID: HRGMv2_1815_6_186
Type: TC
Location: 208654 - 209601 (-)
Gene ID: HRGMv2_1815_6_187
Type: TC
Location: 209594 - 210769 (-)
Gene ID: HRGMv2_1815_6_188
Type: TC
Location: 210773 - 211684 (-)
Gene ID: HRGMv2_1815_6_189
Type: TC
Location: 212039 - 213514 (+)
Gene ID: HRGMv2_1815_6_190
Type: STP
Location: 213712 - 214239 (-)
Gene ID: HRGMv2_1815_6_191
Type: TC
Location: 214388 - 216283 (-)
Gene ID: HRGMv2_1815_6_192
Type: pfam
Location: 216461 - 217570 (-)
Gene ID: HRGMv2_1815_6_193
Type: pfam
Location: 217786 - 218661 (-)
Gene ID: HRGMv2_1815_6_194
Type: CAZyme
Location: 218743 - 221040 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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