Cluster: HRGMv2_1814_CGC8
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1814_8 | HRGMv2_1814_8_11 | 9281 | 11062 | + | GH154 |
| TC | HRGMv2_1814_8 | HRGMv2_1814_8_12 | 11086 | 12351 | + | 2.A.1.5.4 |
| CAZyme | HRGMv2_1814_8 | HRGMv2_1814_8_13 | 12373 | 13563 | + | GH88 |
Gene ID: HRGMv2_1814_8_11
Type: CAZyme
Location: 9281 - 11062 (+)
Type: CAZyme
Location: 9281 - 11062 (+)
Gene ID: HRGMv2_1814_8_12
Type: TC
Location: 11086 - 12351 (+)
Type: TC
Location: 11086 - 12351 (+)
Gene ID: HRGMv2_1814_8_13
Type: CAZyme
Location: 12373 - 13563 (+)
Type: CAZyme
Location: 12373 - 13563 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.