Cluster: HRGMv2_1814_CGC55
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1814_31 | HRGMv2_1814_31_28 | 31098 | 32348 | + | 2.A.66.2.3 |
| CAZyme | HRGMv2_1814_31 | HRGMv2_1814_31_29 | 32345 | 33424 | + | GT56 |
| TC | HRGMv2_1814_31 | HRGMv2_1814_31_30 | 33421 | 34773 | + | 9.B.128.1.1 |
| CAZyme | HRGMv2_1814_31 | HRGMv2_1814_31_31 | 34776 | 35516 | + | GT26 |
| TC | HRGMv2_1814_31 | HRGMv2_1814_31_32 | 35723 | 37108 | + | 2.A.3.1.15 |
Gene ID: HRGMv2_1814_31_28
Type: TC
Location: 31098 - 32348 (+)
Type: TC
Location: 31098 - 32348 (+)
Gene ID: HRGMv2_1814_31_29
Type: CAZyme
Location: 32345 - 33424 (+)
Type: CAZyme
Location: 32345 - 33424 (+)
Gene ID: HRGMv2_1814_31_30
Type: TC
Location: 33421 - 34773 (+)
Type: TC
Location: 33421 - 34773 (+)
Gene ID: HRGMv2_1814_31_31
Type: CAZyme
Location: 34776 - 35516 (+)
Type: CAZyme
Location: 34776 - 35516 (+)
Gene ID: HRGMv2_1814_31_32
Type: TC
Location: 35723 - 37108 (+)
Type: TC
Location: 35723 - 37108 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.