dbCAN Logo

Cluster: HRGMv2_1814_CGC53

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_1814_28 HRGMv2_1814_28_15 18773 19129 - 4.A.2.1.10
pfam HRGMv2_1814_28 HRGMv2_1814_28_16 19131 20009 - Radical_SAM | Fer4_12
pfam HRGMv2_1814_28 HRGMv2_1814_28_17 19975 22272 - Gly_radical | PFL-like
TC HRGMv2_1814_28 HRGMv2_1814_28_18 22385 22705 - 4.A.2.1.10
TC HRGMv2_1814_28 HRGMv2_1814_28_19 22720 23799 - 4.A.2.1.10
TC HRGMv2_1814_28 HRGMv2_1814_28_20 24108 26609 + 4.A.2.1.10
pfam HRGMv2_1814_28 HRGMv2_1814_28_21 26621 27283 + TAL_FSA
pfam HRGMv2_1814_28 HRGMv2_1814_28_22 27296 28399 + Fe-ADH | Fe-ADH_2
CAZyme HRGMv2_1814_28 HRGMv2_1814_28_23 28497 30677 - AA2 | AA2
Gene ID: HRGMv2_1814_28_15
Type: TC
Location: 18773 - 19129 (-)
Gene ID: HRGMv2_1814_28_16
Type: pfam
Location: 19131 - 20009 (-)
Gene ID: HRGMv2_1814_28_17
Type: pfam
Location: 19975 - 22272 (-)
Gene ID: HRGMv2_1814_28_18
Type: TC
Location: 22385 - 22705 (-)
Gene ID: HRGMv2_1814_28_19
Type: TC
Location: 22720 - 23799 (-)
Gene ID: HRGMv2_1814_28_20
Type: TC
Location: 24108 - 26609 (+)
Gene ID: HRGMv2_1814_28_21
Type: pfam
Location: 26621 - 27283 (+)
Gene ID: HRGMv2_1814_28_22
Type: pfam
Location: 27296 - 28399 (+)
Gene ID: HRGMv2_1814_28_23
Type: CAZyme
Location: 28497 - 30677 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

Loading chart...

No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

← Back to Cluster List