Cluster: HRGMv2_1814_CGC47
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_1814_22 | HRGMv2_1814_22_272 | 303164 | 305488 | - | 2.A.6.8.2 |
| pfam | HRGMv2_1814_22 | HRGMv2_1814_22_273 | 305457 | 306062 | - | LolA | LolA_3 |
| pfam | HRGMv2_1814_22 | HRGMv2_1814_22_274 | 306059 | 306481 | - | 4HBT | 4HBT_2 |
| CAZyme | HRGMv2_1814_22 | HRGMv2_1814_22_275 | 306485 | 308176 | - | GT2 |
Gene ID: HRGMv2_1814_22_272
Type: TC
Location: 303164 - 305488 (-)
Type: TC
Location: 303164 - 305488 (-)
Gene ID: HRGMv2_1814_22_273
Type: pfam
Location: 305457 - 306062 (-)
Type: pfam
Location: 305457 - 306062 (-)
Gene ID: HRGMv2_1814_22_274
Type: pfam
Location: 306059 - 306481 (-)
Type: pfam
Location: 306059 - 306481 (-)
Gene ID: HRGMv2_1814_22_275
Type: CAZyme
Location: 306485 - 308176 (-)
Type: CAZyme
Location: 306485 - 308176 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.