Cluster: HRGMv2_1814_CGC45
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1814_22 | HRGMv2_1814_22_225 | 242637 | 245243 | + | GT2 |
| TC | HRGMv2_1814_22 | HRGMv2_1814_22_226 | 245290 | 247605 | + | 4.D.3.1.6 |
| CAZyme | HRGMv2_1814_22 | HRGMv2_1814_22_227 | 247612 | 248718 | + | GH8 |
| TC | HRGMv2_1814_22 | HRGMv2_1814_22_228 | 248700 | 252284 | + | 1.B.55.3.1 |
| STP | HRGMv2_1814_22 | HRGMv2_1814_22_229 | 252582 | 254549 | + | EAL | GGDEF |
| TC | HRGMv2_1814_22 | HRGMv2_1814_22_230 | 254707 | 255993 | + | 2.A.23.1.7 |
Gene ID: HRGMv2_1814_22_225
Type: CAZyme
Location: 242637 - 245243 (+)
Type: CAZyme
Location: 242637 - 245243 (+)
Gene ID: HRGMv2_1814_22_226
Type: TC
Location: 245290 - 247605 (+)
Type: TC
Location: 245290 - 247605 (+)
Gene ID: HRGMv2_1814_22_227
Type: CAZyme
Location: 247612 - 248718 (+)
Type: CAZyme
Location: 247612 - 248718 (+)
Gene ID: HRGMv2_1814_22_228
Type: TC
Location: 248700 - 252284 (+)
Type: TC
Location: 248700 - 252284 (+)
Gene ID: HRGMv2_1814_22_229
Type: STP
Location: 252582 - 254549 (+)
Type: STP
Location: 252582 - 254549 (+)
Gene ID: HRGMv2_1814_22_230
Type: TC
Location: 254707 - 255993 (+)
Type: TC
Location: 254707 - 255993 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.