Cluster: HRGMv2_1814_CGC43
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_1814
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_1814_22 | HRGMv2_1814_22_146 | 156364 | 157326 | + | GT2 |
| pfam | HRGMv2_1814_22 | HRGMv2_1814_22_147 | 157313 | 158143 | - | Polysacc_deac_2 |
| TC | HRGMv2_1814_22 | HRGMv2_1814_22_148 | 158282 | 159499 | - | 1.A.34.1.2 |
Gene ID: HRGMv2_1814_22_146
Type: CAZyme
Location: 156364 - 157326 (+)
Type: CAZyme
Location: 156364 - 157326 (+)
Gene ID: HRGMv2_1814_22_147
Type: pfam
Location: 157313 - 158143 (-)
Type: pfam
Location: 157313 - 158143 (-)
Gene ID: HRGMv2_1814_22_148
Type: TC
Location: 158282 - 159499 (-)
Type: TC
Location: 158282 - 159499 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Citrobacter_B
Species
Citrobacter_B koseri
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.