dbCAN HGM

Cluster: HRGMv2_1814_CGC42

Gene Type	Contig ID	Protein ID	Start	Stop	Direction	Protein Family
CAZyme	HRGMv2_1814_22	HRGMv2_1814_22_131	139936	141213	-	GT30
CAZyme	HRGMv2_1814_22	HRGMv2_1814_22_132	141636	142760	+	GT4
pfam	HRGMv2_1814_22	HRGMv2_1814_22_133	142753	143550	+	Kdo
CAZyme	HRGMv2_1814_22	HRGMv2_1814_22_134	143582	144601	+	GT8
CAZyme	HRGMv2_1814_22	HRGMv2_1814_22_135	144639	145631	+	GT8
CAZyme	HRGMv2_1814_22	HRGMv2_1814_22_136	145656	146600	-	GT8
CAZyme	HRGMv2_1814_22	HRGMv2_1814_22_137	146601	147656	-	GT9
CAZyme	HRGMv2_1814_22	HRGMv2_1814_22_138	147658	148671	-	GT2
TC	HRGMv2_1814_22	HRGMv2_1814_22_139	148664	149947	-	9.B.67.5.1
CAZyme	HRGMv2_1814_22	HRGMv2_1814_22_140	149966	150934	-	GT9
CAZyme	HRGMv2_1814_22	HRGMv2_1814_22_141	150938	151984	-	GT9

Gene ID: HRGMv2_1814_22_131
Type: CAZyme
Location: 139936 - 141213 (-)

Gene ID: HRGMv2_1814_22_132
Type: CAZyme
Location: 141636 - 142760 (+)

Gene ID: HRGMv2_1814_22_133
Type: pfam
Location: 142753 - 143550 (+)

Gene ID: HRGMv2_1814_22_134
Type: CAZyme
Location: 143582 - 144601 (+)

Gene ID: HRGMv2_1814_22_135
Type: CAZyme
Location: 144639 - 145631 (+)

Gene ID: HRGMv2_1814_22_136
Type: CAZyme
Location: 145656 - 146600 (-)

Gene ID: HRGMv2_1814_22_137
Type: CAZyme
Location: 146601 - 147656 (-)

Gene ID: HRGMv2_1814_22_138
Type: CAZyme
Location: 147658 - 148671 (-)

Gene ID: HRGMv2_1814_22_139
Type: TC
Location: 148664 - 149947 (-)

Gene ID: HRGMv2_1814_22_140
Type: CAZyme
Location: 149966 - 150934 (-)

Gene ID: HRGMv2_1814_22_141
Type: CAZyme
Location: 150938 - 151984 (-)

Taxonomic Lineage

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Gene Level Read Mapping

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.